PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG037320.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 437aa MW: 48813 Da PI: 8.4096

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG037320.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.1	2e-13	117	160	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++eE + l + ++++G ++W +a+ ++ gR++ qc+ rw+ TRIDC6BG037320.13 117 RVKWSEEENKVLTQMINKHGLKNWQMVAHAIP-GRSAPQCRQRWR 160 789***************************.*********8 PP
2	Myb_DNA-binding	38.6	2.5e-12	169	211	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W+++E+++l++a++ +G++ W+ ++++ gRt +k++w+ TRIDC6BG037320.13 169 KEAWSEQEELRLIRAHQIYGTK-WREMVKHFP-GRTNGAIKEYWR 211 579*****************.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
QRQRASHSHP THLFLLGPLL RILHRGELRS RCFWRTRGFF PAMSRIGDLM PRERSVKSTS 60 HSRKADGNSA NVSGTPHDIA KHCHDEELGN IGGKLCKNDG HSFKESCSIT NSEVLTRVKW 120 SEEENKVLTQ MINKHGLKNW QMVAHAIPGR SAPQCRQRWR YKIDSAINKE AWSEQEELRL 180 IRAHQIYGTK WREMVKHFPG RTNGAIKEYW RGPMKRKLNS YLSSGLLEQF PDILENLSGT 240 QNNSLDILKG TKVSDILNDT EGLSERNEMS SAVPRISISE VSFTEVGENA DVPGGESADF 300 MYARVASAKA PENIIARSEQ HAKTRRKLDL LSSPVELKSS SHEVNSQRPL QQREQMSPAV 360 GGVSPSNGCH DVLPKILSEC AKPVLSSTGS YQPSDVHSAG TSDPCSLELD ISDLMEMSYF 420 DNLLIFPPGS PHDGNSI

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

QRQRASHSHP THLFLLGPLL RILHRGELRS RCFWRTRGFF PAMSRIGDLM PRERSVKSTS  60
HSRKADGNSA NVSGTPHDIA KHCHDEELGN IGGKLCKNDG HSFKESCSIT NSEVLTRVKW  120
SEEENKVLTQ MINKHGLKNW QMVAHAIPGR SAPQCRQRWR YKIDSAINKE AWSEQEELRL  180
IRAHQIYGTK WREMVKHFPG RTNGAIKEYW RGPMKRKLNS YLSSGLLEQF PDILENLSGT  240
QNNSLDILKG TKVSDILNDT EGLSERNEMS SAVPRISISE VSFTEVGENA DVPGGESADF  300
MYARVASAKA PENIIARSEQ HAKTRRKLDL LSSPVELKSS SHEVNSQRPL QQREQMSPAV  360
GGVSPSNGCH DVLPKILSEC AKPVLSSTGS YQPSDVHSAG TSDPCSLELD ISDLMEMSYF  420
DNLLIFPPGS PHDGNSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	4e-38	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG037320.13