PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG034800.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 28988.4 Da PI: 6.1582 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.9 | 2.8e-06 | 2 | 40 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 RRd++N+ f eL + l ++ ++ +Ka+iL +v+ +k+L TRIDC6BG034800.8 2 RRDKLNEQFMELGTTLDPD----RPRHDKATILGDTVQMLKDL 40 ****************997....799***************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MRRDKLNEQF MELGTTLDPD RPRHDKATIL GDTVQMLKDL TSQVNKLKAE YSSLFEEECE 60 LTKEKNELWS EKASLKSDVD NLNNHYQQRI QMLYPWTTME PSVLIGAPPS YPFSLQVPIP 120 AGAVTMHPQL QPCPFFQNQT LGAISNPCTH MAYSQSCHAP SDQPSSQFST PVPLSSSNRS 180 HSPAQDCRSK SPSLQQASCG GRNDDFGDVA TDLELKTPGS SAPSHSEITN KDSSSDLKRK 240 EKQCIKLING STLIEDRSSS R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 1e-50 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG034800.8 |