PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG028830.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 448aa    MW: 46550.5 Da    PI: 5.4007
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG028830.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS307.53.1e-94804474373
              GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                       l+l+cA+ ++ gdl  a+++       a p+gd+  Rla++f++ALa r  +   + ++  pp +        + aa+ +++++ P+l+f+hl
  TRIDC6BG028830.1  80 LVLACADLLHRGDLDGARRAAGAALSGADPRGDAADRLAHHFARALALRADE---GRSSVGPPAAVGVGVAPASSAAHLAYNKIAPFLRFAHL 169
                       789*****************9999999***********************99...4444446666654445555566666************* PP

              GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl...va 183
                       taNqaIlea++g++rvHi+D+d+ +G+QWp+Llqa+ +R+    gpp++RiTg g+    + + l +tg+rL+ fA++l++pf+f++l    +
  TRIDC6BG028830.1 170 TANQAILEAAAGARRVHIVDLDAAHGVQWPPLLQAICDRAdaaVGPPEVRITGAGP----DLDVLLRTGDRLRAFASSLNLPFRFHPLllpCT 258
                       ***************************************988889***********....9***************************77666 PP

              GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsle 272
                        +l++ +   L+++p+E+laVn+vl lhrl   +++l    +++L+ v+s++P vv+++e+  + +++    ++ +r++ a+++ysa+fd+le
  TRIDC6BG028830.1 259 AQLAADRAACLELHPDETLAVNCVLFLHRLS-GDGEL----TAFLRWVRSMNPAVVTIAERQGEAGRGedddDLPRRVAAAMDFYSAVFDALE 346
                       6888889999********************7.44555....55******************977644334459******************** PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkd 364
                       a++p+ s er  vE+e+lg ei  vva  g+    r +++e W ++ ++aG++p p s++a++qa+lllr ++ s+gy  ee  g+ +lgW++
  TRIDC6BG028830.1 347 ATVPPGSAERLAVEQEILGTEIDAVVAGPGSG-GGRPRSFEAWTAAARAAGLSPWPASTFAVSQARLLLRLHYpSEGYAAEEAGGACFLGWQT 438
                       *******************************9.9*********************************************************** PP

              GRAS 365 rpLvsvSaW 373
                       r+L+svS+W
  TRIDC6BG028830.1 439 RTLMSVSSW 447
                       ********* PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
ISLSLYDRSC PSVTEAAGAA ASSEDAAATS ASALLLSRPS HALRPPPATA ADAMLDPPEP  60
DDDAAQPPRA PVAAASPRGL VLACADLLHR GDLDGARRAA GAALSGADPR GDAADRLAHH  120
FARALALRAD EGRSSVGPPA AVGVGVAPAS SAAHLAYNKI APFLRFAHLT ANQAILEAAA  180
GARRVHIVDL DAAHGVQWPP LLQAICDRAD AAVGPPEVRI TGAGPDLDVL LRTGDRLRAF  240
ASSLNLPFRF HPLLLPCTAQ LAADRAACLE LHPDETLAVN CVLFLHRLSG DGELTAFLRW  300
VRSMNPAVVT IAERQGEAGR GEDDDDLPRR VAAAMDFYSA VFDALEATVP PGSAERLAVE  360
QEILGTEIDA VVAGPGSGGG RPRSFEAWTA AARAAGLSPW PASTFAVSQA RLLLRLHYPS  420
EGYAAEEAGG ACFLGWQTRT LMSVSSWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.17e-70GRAS family protein