PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG026040.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 562aa MW: 61039.4 Da PI: 6.5169

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG026040.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.7	5.2e-28	143	196	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl TRIDC6BG026040.1 143 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 196 79*****************.******************************8 PP
2	Myb_DNA-binding	36.7	9.9e-12	145	195	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++ t++++ s++qky+ TRIDC6BG026040.1 145 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 195 678***********************************************7 PP
3	Response_reg	52.2	3.3e-18	5	73	40	109
HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 40 kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 ++ ++Dl++ D+ mp+mdG++ll+ e++lp+i+++a+ge +++ + + Ga d+l Kp+ e+l + TRIDC6BG026040.1 5 NKDQFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKT 73 4566*****************87754.558*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MLRENKDQFD LVISDVHMPD MDGFKLLELV GLEMDLPVIM LSANGETQTV MKGITHGACD 60 YLLKPVRLEQ LKTIWQHVIR RNTKNRGSDN DDAGQKGPNA EGENGGANRN KRQSRRDRDE 120 NGDDGDDSDE NSNDNGDSSS QKKPRVVWSV ELHRKFVAAV NQLGIDKAVP KKILDLMNVE 180 NITRENVASH LQKYRLYLKR MSMDASRQAN LVAALGGRNP AYSNMNSMDV FRHYSNTYGR 240 YRPVPTSNHS QSNNLVARMN SPSAYGMHGL LSPQSQPLHL GHAQNNLGTS LNDLGVNNGN 300 LIRGAHMSTM VTGTSGNSFA NISNGAPLAP TNRAVQSLES NNRQHLGRIN SSSTDSFSSF 360 ASDSPHFPDL GRSSNTWQTA VPSNIQQLGQ NGSMSQASLH GNGPRMEPVS SYAPPSNQIT 420 SLGNDMQNQV APLASNSLPM VFNQGAAPFT FGNSTNSREA LNSNLAFSNS GINISLPNLR 480 IDNSVVPRQT LDGGNTGGVP SLQDGKIDQQ AVGNQLNYNN NDLVGTSGLQ RELSGGLDDI 540 VVDMFRPDND NGGIFDTDWG LV

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MLRENKDQFD LVISDVHMPD MDGFKLLELV GLEMDLPVIM LSANGETQTV MKGITHGACD  60
YLLKPVRLEQ LKTIWQHVIR RNTKNRGSDN DDAGQKGPNA EGENGGANRN KRQSRRDRDE  120
NGDDGDDSDE NSNDNGDSSS QKKPRVVWSV ELHRKFVAAV NQLGIDKAVP KKILDLMNVE  180
NITRENVASH LQKYRLYLKR MSMDASRQAN LVAALGGRNP AYSNMNSMDV FRHYSNTYGR  240
YRPVPTSNHS QSNNLVARMN SPSAYGMHGL LSPQSQPLHL GHAQNNLGTS LNDLGVNNGN  300
LIRGAHMSTM VTGTSGNSFA NISNGAPLAP TNRAVQSLES NNRQHLGRIN SSSTDSFSSF  360
ASDSPHFPDL GRSSNTWQTA VPSNIQQLGQ NGSMSQASLH GNGPRMEPVS SYAPPSNQIT  420
SLGNDMQNQV APLASNSLPM VFNQGAAPFT FGNSTNSREA LNSNLAFSNS GINISLPNLR  480
IDNSVVPRQT LDGGNTGGVP SLQDGKIDQQ AVGNQLNYNN NDLVGTSGLQ RELSGGLDDI  540
VVDMFRPDND NGGIFDTDWG LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	9e-80	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG026040.1