PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG025750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | DBB | ||||||||
Protein Properties | Length: 201aa MW: 20889.9 Da PI: 4.824 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.9 | 1.5e-06 | 5 | 45 | 6 | 39 |
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C+ +++ e+ C ++ lC+ C + H+ H+v TRIDC6BG025750.1 5 CDACGQAEAAVLCCADEAALCRRCDAAVHSAnklagrhHRV 45 *****************************668899996655 PP | |||||||
2 | zf-B_box | 27.2 | 8.2e-09 | 68 | 107 | 4 | 37 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + C+ ++ek +fC +++ llC++C ++H H TRIDC6BG025750.1 68 PACDICQEKTGYFFCVEDRALLCRSCDITIHTAtphastH 107 57****************************9556644455 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MKIGCDACGQ AEAAVLCCAD EAALCRRCDA AVHSANKLAG RHHRVALLSS APAGSSSPGT 60 GDDGGTHPAC DICQEKTGYF FCVEDRALLC RSCDITIHTA TPHASTHRRF LITGVRVGVD 120 QDHIGDVSGA TVGSPSNNSA NGSNSMPTSE NFAIANGQRS EEGAGLIGGG EDDIGQQQQW 180 PWSDIFAEDG VGMDQHQCYP G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78600.1 | 2e-43 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG025750.1 |