PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG023640.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 237aa MW: 27339.2 Da PI: 9.3544 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 22.9 | 2.8e-07 | 12 | 51 | 52 | 91 |
FAR1 52 rrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +++ + +++C+a +++ ++d+ w+++k ++ HnH+l+p TRIDC6BG023640.3 12 VENTRSCQCECQALIRLLWTEDNGWYIAKHRESHNHSLSP 51 567788899999999999999****************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MHQVAMFGKA SVENTRSCQC ECQALIRLLW TEDNGWYIAK HRESHNHSLS PNFGETIHWS 60 SHKHFDVYSR DLRKHLRQNN VNLAKVYSIV GIFFGSMKNV PFKKRSLCNL CGQISREQSD 120 DNVRKTMEVF AEIGAKDPHF KYRVQPDKEG GIKNLMWASG SNRLQYTFSG SALTFDTTYM 180 TNLYDMPFRL FVGVNNHFQR VIPAGLIVCG ETVESFKWVF SEFLRIMGGA APKNYTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-23 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG023640.3 |