PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG021530.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 224aa MW: 23864.1 Da PI: 10.0832 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 53 | 4.7e-17 | 133 | 170 | 1 | 36 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 C++Cg ++ Tp++Rrgpdg++tLCnaCGl ++ kg++ TRIDC6BG021530.5 133 CQHCGISSnnTPMMRRGPDGPRTLCNACGLAWANKGMM 170 *****99889*************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
GAPQAPSNTL TLSFQGEVFV FESVSAEKVQ AVLLLLGGRE LGPGMGVGPS SSASYSKRLN 60 SHRMASLMRF REKRKERNFD KKIRYSVRKE VAHRMQRHKG QFTSSKAKAE EAAAAANSDW 120 GAVEGRPLSA PVCQHCGISS NNTPMMRRGP DGPRTLCNAC GLAWANKGMM REVKGHTPLK 180 VVPPATDDAN GVAEAPTAEQ QHLALEAAPE APVAPAPAAN GHDS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 4e-56 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG021530.5 |