PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG021530.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 298aa    MW: 32247.6 Da    PI: 5.4149
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG021530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.17.6e-16251286134
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C++Cg ++  Tp++Rrgpdg++tLCnaCGl ++ k+
  TRIDC6BG021530.1 251 CQHCGISSnnTPMMRRGPDGPRTLCNACGLAWANKH 286
                       *****99889**********************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MSGHHDASKP YQPRRGPERP PPQQPAEDEE AAAAAAAMAE VEAAAGAMEQ YEPHLEHGEE  60
EEEEEEEGEE EGEEEGEEGH GYAYDYVTGE AVPMDEEGAA AAAHAHHGAA GPHGMEAGGA  120
PQAPSNTLTL SFQGEVFVFE SVSAEKVQAV LLLLGGRELG PGMGVGPSSS ASYSKRLNSH  180
RMASLMRFRE KRKERNFDKK IRYSVRKEVA HRMQRHKGQF TSSKAKAEEA AAAANSDWGA  240
VEGRPLSAPV CQHCGISSNN TPMMRRGPDG PRTLCNACGL AWANKHYRRF CCCTTYIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-51GATA family protein