PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG020480.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 333aa    MW: 35855 Da    PI: 9.8261
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG020480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.1e-13116165255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+ h + Er RR+r+ + f +L  llP++   p  K++K++i+ +A++YIksL+
  TRIDC6BG020480.1 116 RELHIITERERRRRMSEMFTKLHGLLPTL---P-DKVDKSSIVMEAIHYIKSLE 165
                       7889************************6...3.9*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
YFQKTQKLCA SFLEASRKRL LSTSKFHTPY FVFKFCAMAK DNDNNAPPAT SSDSMSSGKD  60
NKGSKASSRL VLGGAIDKGK GVPKVEEEEE GCRSKGKIMT APVVTARRSG GRRGDRELHI  120
ITERERRRRM SEMFTKLHGL LPTLPDKVDK SSIVMEAIHY IKSLEGTVSE LEKQKLERDF  180
ARGNPAAAAN GGVSSSVPMA MATPVTGASA GGIWQTGAGP APSMSLVGAV TAAPAPVPLQ  240
TWSGPNVVLS LSGNNAYIHM SVERRPGVLT MVTAVLEKHG IDVVTTGISS DPSQCMYTIQ  300
ARINGMRNQF GDNVAFDDIY KLAVSEIMVW LSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-29bHLH family protein