PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG017880.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 413aa MW: 45726.8 Da PI: 5.5961

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG017880.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	79.5	5.2e-25	3	69	26	101
SEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 26 nsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkk 101 +sfvv+++ efa ++Lp yFkhsnf+SF+RQLn+YgF+k++ e+ weF +++F kg+k+ll++i r+k TRIDC6BG017880.1 3 TSFVVWNSPEFAARLLPAYFKHSNFSSFIRQLNTYGFRKIDPER---------WEFGNEYFVKGQKHLLKNIYRRK 69 79*************************************999.........*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
SDTSFVVWNS PEFAARLLPA YFKHSNFSSF IRQLNTYGFR KIDPERWEFG NEYFVKGQKH 60 LLKNIYRRKP IHSHSHQPGA LPDNERSFFE DEIDRLAREK ANLQAELWKS KQQESGTMFQ 120 IEALERRAVD MELRQGKMIA FLQQASKNPH FVGKLVKMAE ASSMFADALH KKRRLSGLDY 180 AVEATETASF CDDHSPTSRQ ETGNLLNQHF SDKLKLGLCS AAAESNLVTL STQSSHEDNC 240 SPHGRHPPGH EGMGTGCLPL VPQMMELSDT GTSICPSKSS FFTPAVNDEG LSPCHLSLTL 300 ASCSMDVDRG QASNADGSTT VDEGSDNPPE ATTAAMGVNQ KASVDAGTAE ALRPREDMRV 360 ATEPAAPVKA NDNFWEQFLT ERPGDASSGP RDPSMDKEQA ERGEKDDTEQ LKL

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

SDTSFVVWNS PEFAARLLPA YFKHSNFSSF IRQLNTYGFR KIDPERWEFG NEYFVKGQKH  60
LLKNIYRRKP IHSHSHQPGA LPDNERSFFE DEIDRLAREK ANLQAELWKS KQQESGTMFQ  120
IEALERRAVD MELRQGKMIA FLQQASKNPH FVGKLVKMAE ASSMFADALH KKRRLSGLDY  180
AVEATETASF CDDHSPTSRQ ETGNLLNQHF SDKLKLGLCS AAAESNLVTL STQSSHEDNC  240
SPHGRHPPGH EGMGTGCLPL VPQMMELSDT GTSICPSKSS FFTPAVNDEG LSPCHLSLTL  300
ASCSMDVDRG QASNADGSTT VDEGSDNPPE ATTAAMGVNQ KASVDAGTAE ALRPREDMRV  360
ATEPAAPVKA NDNFWEQFLT ERPGDASSGP RDPSMDKEQA ERGEKDDTEQ LKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-92	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG017880.1