PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG017730.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 385aa    MW: 42425.5 Da    PI: 4.9927
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG017730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.2e-17115164255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +++G+r+++ +g+W+AeIrdps+     r++lg+f  ae Aa+a++  ++k++g
  TRIDC6BG017730.1 115 KFRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFNNAEAAARAYDVEARKIYG 164
                       89*******.**********965...4********************9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MYGGASLADL EVPMVTQKVT EAILWPEKKK PRLGGSGDTR FMGLDGRRGL GLDDNKEDFK  60
AEFEEFEADS GESDLDLGHS GVDEKDDNKE VIEIKPVTAV KGRSLSQAKR KRKNKFRGIR  120
QRPWGKWAAE IRDPSKGVRV WLGTFNNAEA AARAYDVEAR KIYGNKANVN FPEEPTVPQK  180
HRTRRAAPKA PKLSASREPI VNNLANPNAF IYPSTNFASN QPLALHENVS FVPAMNSDAP  240
VEASVMNLHS DQESNSFGYS NLGWNYDTRT SDISSTAPIS TIADGVESAL VQSNPYNSVV  300
IAERAESIAL VQSNTYNSVV PPSMENNDVD FVPWVRLLMD DGVVEPIDSL LNFDVPREVI  360
GNMDIWSSDG MPMCGNFSKG SKPFI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179185QKHRTRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.12e-27ERF family protein