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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC6BG015840.9 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | bZIP | ||||||||
| Protein Properties | Length: 300aa MW: 31700.7 Da PI: 6.5908 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 70.7 | 2.2e-22 | 206 | 268 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elk+++rk +NRe+ArrsR+RK+ae+eeL +++++L++eN++L+ el+++kke+++l s++
TRIDC6BG015840.9 206 ERELKKQKRKLSNRESARRSRLRKQAECEELGQRAEALKSENSSLRIELDRIKKEYEELLSKN 268
89***********************************************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 300 aa Download sequence |
MPPHGFFPPP VAAGQAHPYM WGAQHMVPPY GTPPPPYMMY PPGTVYAHPT APGVHPFHYH 60 MQTNGNLEPA GAQGAAPGAA ETNGKNEPGK TSGPSANGVT SNSESGSDSE SEGSDANSQN 120 DSHSKENDVN ENGSAQNGVS HSSSHGTFNK PMPLVPVQSG AVIGVAGPAT NLNIGMDYWG 180 ATGSSPVPAM RGKAPSGSAR GEQWDERELK KQKRKLSNRE SARRSRLRKQ AECEELGQRA 240 EALKSENSSL RIELDRIKKE YEELLSKNTS LKESGGGGGD AVPDMNERGD TNGGSHQKEP |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 209 | 216 | LKKQKRKL |
| 2 | 223 | 229 | RRSRLRK |
| 3 | 223 | 230 | RRSRLRKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT2G35530.1 | 2e-48 | bZIP family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC6BG015840.9 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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