PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG013150.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 553aa MW: 58717 Da PI: 4.5861

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG013150.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.8	1.7e-12	292	335	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ErrRR+++N+++ +Lr+l+P+ +K++ a+iL A++YI Lq TRIDC6BG013150.2 292 IAERRRRKKLNNRLYTLRSLVPNI-----TKMDRASILGDAIDYIVGLQ 335 79*******************7.....7*************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MGGGEYHQQS IIGGLASVHG HGEGGGGTVE AALRPLVGGA HGWDYCIYWR LSPDQRFLEM 60 TGFCCSAEFE AQVATLADVP SSIPLDSSSI GMHAQALLSN QPIWQSSGGA PGPDLLTGYE 120 AASSGAEKTR LLVPVAGGIV ELFASRYMAE EQQMAELVMA QCGGGGQGWQ ETEAQGFAWD 180 AAAAAADQGR LYAAASLNLF DGAGGSGSGE PFLAGVQEDG AAGVGWQYAA ESSERPSAVA 240 QEHQQLHGSG VGRADSGSER SDMQLGDPDD GETQRGSGKD GGGKRQQCKN LIAERRRRKK 300 LNNRLYTLRS LVPNITKMDR ASILGDAIDY IVGLQKQVKD LQDELEDPNP RGGTGGDSKA 360 PDVLLDDHPP PGLDNDEDSP QQQPFPSAGG KGARKEEAGD EEGKEAEDQD MEPQVEVRQV 420 EGKEFFLQVL CSHKSGRFVR IMGEIAALGL QITSVNVTSY NKLVLNVFRA VMKDNEAAVP 480 ADRVRDSLLE VTREMYGGGG AWSSRLPPPP STNAKLDGMD GQAVPAAAGD HYQLHHQVLG 540 GYHHQHLQYL AMD

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MGGGEYHQQS IIGGLASVHG HGEGGGGTVE AALRPLVGGA HGWDYCIYWR LSPDQRFLEM  60
TGFCCSAEFE AQVATLADVP SSIPLDSSSI GMHAQALLSN QPIWQSSGGA PGPDLLTGYE  120
AASSGAEKTR LLVPVAGGIV ELFASRYMAE EQQMAELVMA QCGGGGQGWQ ETEAQGFAWD  180
AAAAAADQGR LYAAASLNLF DGAGGSGSGE PFLAGVQEDG AAGVGWQYAA ESSERPSAVA  240
QEHQQLHGSG VGRADSGSER SDMQLGDPDD GETQRGSGKD GGGKRQQCKN LIAERRRRKK  300
LNNRLYTLRS LVPNITKMDR ASILGDAIDY IVGLQKQVKD LQDELEDPNP RGGTGGDSKA  360
PDVLLDDHPP PGLDNDEDSP QQQPFPSAGG KGARKEEAGD EEGKEAEDQD MEPQVEVRQV  420
EGKEFFLQVL CSHKSGRFVR IMGEIAALGL QITSVNVTSY NKLVLNVFRA VMKDNEAAVP  480
ADRVRDSLLE VTREMYGGGG AWSSRLPPPP STNAKLDGMD GQAVPAAAGD HYQLHHQVLG  540
GYHHQHLQYL AMD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	294	301	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	4e-43	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG013150.2