PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG013140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 553aa MW: 58906.2 Da PI: 4.4144

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG013140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.1e-12	292	335	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 e+Er+RR+++N+++ +Lr+l+P+ +K++ a+iL A++YI Lq TRIDC6BG013140.1 292 EAERKRRKKLNERLYKLRSLVPNI-----TKMDRASILGDAIDYIVGLQ 335 89*******************7.....7*************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MGGGDYHQQS LNGGAAVHGH GGGGGGTVEA ALRPLVGGSH GWDYCIYWRL SPDQRFLEMA 60 GFCCSAEFEA QVATLADVPC SIPLDSSSVG MHAQALLSNQ PIWQSSGGSP GPDLLTGYEA 120 ASSGGEKTRL LVPVAGGIVE LFASRYMAEE QQMAELVMAQ CGGGGQGWQE TEAQGFAWDA 180 AAADPGRLYA AASLNLFDGA GGSGSGEPFL AGVQEDGAAG VGWQYAAESS EPPSTVAQEH 240 QQLHGSGVGR ADSGSEGSDM QLGDPDDEVD GETQRGSGKD GCGKRQQCKN LEAERKRRKK 300 LNERLYKLRS LVPNITKMDR ASILGDAIDY IVGLQKQVKD LQDELEDPNL PGITGGDSKA 360 PDVLLDDHPP PGLDNDEDSP QQQPFPSAGG KRLRKEEAGD EEEKEAEDQD MEPQVEVRQV 420 EGKEFFLQVL CSHKSGRFVR IMDEIAALGL QITSINVTSY NKLVLNVFRA VMKDNEAAVP 480 ADRVRDSLLE VTREMYSGGG TWSSPVPPPP PTNAKLDGMD GQAVPAAAGD HYQLHHQVLG 540 GYHHQHLQYL AMD

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MGGGDYHQQS LNGGAAVHGH GGGGGGTVEA ALRPLVGGSH GWDYCIYWRL SPDQRFLEMA  60
GFCCSAEFEA QVATLADVPC SIPLDSSSVG MHAQALLSNQ PIWQSSGGSP GPDLLTGYEA  120
ASSGGEKTRL LVPVAGGIVE LFASRYMAEE QQMAELVMAQ CGGGGQGWQE TEAQGFAWDA  180
AAADPGRLYA AASLNLFDGA GGSGSGEPFL AGVQEDGAAG VGWQYAAESS EPPSTVAQEH  240
QQLHGSGVGR ADSGSEGSDM QLGDPDDEVD GETQRGSGKD GCGKRQQCKN LEAERKRRKK  300
LNERLYKLRS LVPNITKMDR ASILGDAIDY IVGLQKQVKD LQDELEDPNL PGITGGDSKA  360
PDVLLDDHPP PGLDNDEDSP QQQPFPSAGG KRLRKEEAGD EEEKEAEDQD MEPQVEVRQV  420
EGKEFFLQVL CSHKSGRFVR IMDEIAALGL QITSINVTSY NKLVLNVFRA VMKDNEAAVP  480
ADRVRDSLLE VTREMYSGGG TWSSPVPPPP PTNAKLDGMD GQAVPAAAGD HYQLHHQVLG  540
GYHHQHLQYL AMD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	294	301	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	8e-37	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG013140.1