PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG010020.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 279aa    MW: 31451.4 Da    PI: 4.9995
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG010020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.29.3e-51191441128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeelv +yL+++++g++ ++  +i+evd+y+++Pw+Lp+++  + +ewyfF++rd+ky++g+r+nra+  gyWkatg d++v 
  TRIDC6BG010020.1  19 LPPGFRFHPTDEELVADYLCARAAGRPAPV-PIIAEVDLYRFDPWELPERALFGAREWYFFTPRDRKYPNGSRPNRAAGGGYWKATGADRPVA 110
                       79*************************999.88***************8777899************************************** PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +  g++vg+kk Lvfy+gr   g+ktdW+mheyrl
  TRIDC6BG010020.1 111 R-AGRTVGIKKALVFYHGRPAAGVKTDWIMHEYRL 144
                       9.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
QTMVMAAAER RDAEAELNLP PGFRFHPTDE ELVADYLCAR AAGRPAPVPI IAEVDLYRFD  60
PWELPERALF GAREWYFFTP RDRKYPNGSR PNRAAGGGYW KATGADRPVA RAGRTVGIKK  120
ALVFYHGRPA AGVKTDWIMH EYRLAGAGAK KDGSSLRLDD WVLCRLYNKK NQWEKMQRQR  180
QEEEEVAAKA AASQSVSWGE TRTPESDVDN DTFLELDSLP EFQTTNVILP KEEVQELGND  240
DWLMGISLHD LQGPGSLMLP WEDSYAASFL SPVTAMKME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-78NAC family protein