PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG001960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 215aa MW: 23782.2 Da PI: 9.6546 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 22.8 | 2.1e-07 | 189 | 209 | 1 | 21 |
G2-like 1 kprlrWtpeLHerFveaveqL 21 k++++Wtpe+He Fv+av+qL TRIDC6BG001960.1 189 KKKVEWTPEMHELFVNAVTQL 209 6899****************9 PP | |||||||
2 | Response_reg | 42.4 | 3.8e-15 | 16 | 126 | 1 | 108 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT....SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg....mdGlellkeireeepklpiivvtahgeeedal 87 vl vdD+p+ ++ l+q+l++ gy ev+ +++ +al+ ++++ +D i++ + g mdGl+llk+ ++ + i+v+++ +++e+++ TRIDC6BG001960.1 16 VLAVDDDPVCLQTLTQMLRRGGY-EVTPSASPADALKEVEKNPdgIDFIMTVAQTRGrgrgMDGLDLLKRVGKRY--PVILVFSGDETMETRE 105 799********************.777777777888888777779999999866655423478888888885555..57888899999***** PP HHHHTTESEEEESS--HHHHH CS Response_reg 88 ealkaGakdflsKpfdpeelv 108 + + Ga +Kp ++++ TRIDC6BG001960.1 106 RGKQGGACYLMEKPLRDSQIY 126 **************9999885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
QDMATAKLME TEGLKVLAVD DDPVCLQTLT QMLRRGGYEV TPSASPADAL KEVEKNPDGI 60 DFIMTVAQTR GRGRGMDGLD LLKRVGKRYP VILVFSGDET METRERGKQG GACYLMEKPL 120 RDSQIYFIWQ QVVRWRRKAA GAVTENPNPR HSQGIHLDDT PRKRGQGVND SNKGKGASEG 180 GLQLGITKKK KVEWTPEMHE LFVNAVTQLK TTGGA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 4e-18 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG001960.1 |