PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG001490.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 421aa    MW: 46439.4 Da    PI: 5.8174
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG001490.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1521.4e-1614474117
              CG-1  74 KvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117
                       +vg+v++l+cyYah+e+np fqrr +w+Le ++++ivlv+y+ev
  TRIDC6BG001490.2   1 RVGNVDALSCYYAHGEQNPYFQRRYFWMLEPAYDHIVLVQYREV 44 
                       599***************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
RVGNVDALSC YYAHGEQNPY FQRRYFWMLE PAYDHIVLVQ YREVAEGRYY STLSNESAES  60
LSKLSYPNYL HGNHGSTPDF SEGNGSIQSS ITEASSYSAN KEYNHDTRLT LTRKQQFSIR  120
EISPEWAFCY EITKVIITGD FLCDPSNICW AVMFGDIEVP VEIVQPGVLR CRTPLHSAGK  180
LTLCITTGNM KVCSEFRDFE FRANSAASSF TDLAPLSRSM KSAEELSLLA KFARILLRDN  240
GSSAVSVDDP QPGRSPKVQM NEENWQRLIN ALDVGCESPL RGVHWIMEEL LKSKLQQWLS  300
LKLQGDDGTC SLSRNEQGIM HLISALGYDW ALSSVLGAGV GINLRDSNGW TALHWAAYFG  360
REKMVAALVA AGASAPAVTD PSAQDPVGKT AAFLASERGH MGLAGYLSEV SLTSNLASLT  420
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-79CAMTA family protein