PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG061640.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 261aa    MW: 29122.1 Da    PI: 9.5791
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG061640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.31.3e-0868132657
                       S--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC............TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   6 tftkeqleeLeelFek.nrypsaeereeLAkkl............gLterqVkvWFqNrRakekk 57 
                       +ft+ ++  +ee+ +  n  p++  ++ L+++              ++ +qV +WFqNrR+ +k+
  TRIDC6AG061640.1  68 RFTHREVAKMEEVLRDlNAMPQRPVIQALTDEFntsshrsgngkvPVQYKQVHTWFQNRRYTQKR 132
                       69999999******999*************************99999***************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
GSKGRQIERH TQHRILPPPS GPLISISLLL FRRHSGCPHL TGVRRTQAQQ PGAGEVRMTG  60
LPPRLVFRFT HREVAKMEEV LRDLNAMPQR PVIQALTDEF NTSSHRSGNG KVPVQYKQVH  120
TWFQNRRYTQ KRRGERPPAR GKMLPTGAEA QHPASYWVQS SCPSNAGNTS SDGGLVQLEA  180
KSPRNGAWYD VAAIQSCRLS ETGDQEVQVW FSGFGAEEEE WINVCKSVRL RSVPCIATEC  240
VGVLPGDLIL CYQVVILNDF S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.11e-47HB-other family protein