PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG061580.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 363aa MW: 40337.2 Da PI: 6.9741

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG061580.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.6	3.6e-07	26	92	4	57
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC............TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkkl............gLterqVkvWFqNrRakekk 57 R +ft+ ++ + e+ + n p++ ++ L++ ++ +qV +WFqNrR+ +k+ TRIDC6AG061580.3 26 RIRFTHAEVAKMLEVLRDlNAMPKRPIIQGLTDDFnaspdrsgdgqvPVQYSQVHTWFQNRRYTQKR 92 666666666666666665577777777777777777777777777778899*************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
YCHRHRSSTH RSGAATRGGE VRMTGRIRFT HAEVAKMLEV LRDLNAMPKR PIIQGLTDDF 60 NASPDRSGDG QVPVQYSQVH TWFQNRRYTQ KRRGERPPAQ GKMLPTGAEA QHPASYRVQS 120 SCPSNSESQS GNASSDCGLV QLEAKSPTNG AWFDVAAILS YRFSETGDQE IQVWFSGFGA 180 EEEEWINVCK SVRLRSLPCI DTECVGVLPG DLILCYQVRK EQALYFDAHV LEVERRTHDL 240 RGCRCSFLVR YDHDHSEEMV PLRKVCRRPS ADVKIDIVID DSLAEPKAQK SHKRMDTNPD 300 EVTVVPGPPN QGGRSDKLAA PLLITPDSTH RDSVADEQMG DIEAAPKGEA TSKAHGDKMN 360 VGA

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

YCHRHRSSTH RSGAATRGGE VRMTGRIRFT HAEVAKMLEV LRDLNAMPKR PIIQGLTDDF  60
NASPDRSGDG QVPVQYSQVH TWFQNRRYTQ KRRGERPPAQ GKMLPTGAEA QHPASYRVQS  120
SCPSNSESQS GNASSDCGLV QLEAKSPTNG AWFDVAAILS YRFSETGDQE IQVWFSGFGA  180
EEEEWINVCK SVRLRSLPCI DTECVGVLPG DLILCYQVRK EQALYFDAHV LEVERRTHDL  240
RGCRCSFLVR YDHDHSEEMV PLRKVCRRPS ADVKIDIVID DSLAEPKAQK SHKRMDTNPD  300
EVTVVPGPPN QGGRSDKLAA PLLITPDSTH RDSVADEQMG DIEAAPKGEA TSKAHGDKMN  360
VGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	3e-74	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG061580.3