PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG059650.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 601aa MW: 67059.4 Da PI: 4.6317

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG059650.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.3	1.3e-48	16	152	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkya.........tgkrknratksgy 82 ++pGfrFhPtdeelv++yL ++v g++l++ ++i+evd+y++ePwdLp +++++++ +wyfF++ d+k a g+r+nrat +gy TRIDC6AG059650.6 16 MAPGFRFHPTDEELVSYYLLRRVLGRRLRI-DAIAEVDLYRLEPWDLPplSRIRSRDAQWYFFARLDRKVAgagaggrggPGNRTNRATPRGY 107 579*************************.99**********96669999999*******99877777665577****** PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 Wk+tgkd+ev++ +g++vg+kktLvf+ grapkg +t+Wvmheyrl TRIDC6AG059650.6 108 WKTTGKDREVFH-RGRAVGMKKTLVFHAGRAPKGDRTNWVMHEYRL 152 ********.999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
LDPMAGSPPP AEEVPMAPGF RFHPTDEELV SYYLLRRVLG RRLRIDAIAE VDLYRLEPWD 60 LPPLSRIRSR DAQWYFFARL DRKVAGAGAG GRGGPGNRTN RATPRGYWKT TGKDREVFHR 120 GRAVGMKKTL VFHAGRAPKG DRTNWVMHEY RLLDNDGPQD MHVVCRIFQK VGSGPQNGAQ 180 YGAPYMEEEW ENEDDAIENT PTSGTSTEML AITDTASAES NVEDEHIFSG INERTLEVLI 240 PQEIAPLQAI APPQAQDFNG TGMVSYADGD VPLDEILQEP VSDVSADNTG EPEEQSPLDD 300 HFSLADLSGC PNQDDGYVRQ AGPIMFSDPS NGDQAYYPMR TYGNRNHAYR ALSAEEFSDT 360 GNGTNAYSCP SDEQNLYLPT NGLPFPQQMD DNAPFYEASS DHKWENGKDD YVNVDDISLF 420 EDDDIMALLN ASDNDFSLDL LGPVDGSNSQ LPAASNFDQK VCFTTVTSFS YFMMKQRLNM 480 ARLRLVPVRT FIQTPWFQMC QWMTMLAKDT SQTCWVHTQP HLQWLLNSRQ PQENPSLRSA 540 GLVRFVSRRA SSSSATTVSP ATRAAGPCRR TESSTCSFLS PWRTTCQRSP LLSTTSQLLH 600 G

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

LDPMAGSPPP AEEVPMAPGF RFHPTDEELV SYYLLRRVLG RRLRIDAIAE VDLYRLEPWD  60
LPPLSRIRSR DAQWYFFARL DRKVAGAGAG GRGGPGNRTN RATPRGYWKT TGKDREVFHR  120
GRAVGMKKTL VFHAGRAPKG DRTNWVMHEY RLLDNDGPQD MHVVCRIFQK VGSGPQNGAQ  180
YGAPYMEEEW ENEDDAIENT PTSGTSTEML AITDTASAES NVEDEHIFSG INERTLEVLI  240
PQEIAPLQAI APPQAQDFNG TGMVSYADGD VPLDEILQEP VSDVSADNTG EPEEQSPLDD  300
HFSLADLSGC PNQDDGYVRQ AGPIMFSDPS NGDQAYYPMR TYGNRNHAYR ALSAEEFSDT  360
GNGTNAYSCP SDEQNLYLPT NGLPFPQQMD DNAPFYEASS DHKWENGKDD YVNVDDISLF  420
EDDDIMALLN ASDNDFSLDL LGPVDGSNSQ LPAASNFDQK VCFTTVTSFS YFMMKQRLNM  480
ARLRLVPVRT FIQTPWFQMC QWMTMLAKDT SQTCWVHTQP HLQWLLNSRQ PQENPSLRSA  540
GLVRFVSRRA SSSSATTVSP ATRAAGPCRR TESSTCSFLS PWRTTCQRSP LLSTTSQLLH  600
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	2e-57	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG059650.6