PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG059650.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 392aa MW: 43245.6 Da PI: 4.4727

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG059650.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.4	5.9e-49	13	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkya.........tgkrknratksgy 82 ++pGfrFhPtdeelv++yL ++v g++l++ ++i+evd+y++ePwdLp +++++++ +wyfF++ d+k a g+r+nrat +gy TRIDC6AG059650.5 13 MAPGFRFHPTDEELVSYYLLRRVLGRRLRI-DAIAEVDLYRLEPWDLPplSRIRSRDAQWYFFARLDRKVAgagaggrggPGNRTNRATPRGY 104 579*************************.99**********96669999999*******99877777665577****** PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 Wk+tgkd+ev++ +g++vg+kktLvf+ grapkg +t+Wvmheyrl TRIDC6AG059650.5 105 WKTTGKDREVFH-RGRAVGMKKTLVFHAGRAPKGDRTNWVMHEYRL 149 ********.999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MAGSPPPAEE VPMAPGFRFH PTDEELVSYY LLRRVLGRRL RIDAIAEVDL YRLEPWDLPP 60 LSRIRSRDAQ WYFFARLDRK VAGAGAGGRG GPGNRTNRAT PRGYWKTTGK DREVFHRGRA 120 VGMKKTLVFH AGRAPKGDRT NWVMHEYRLL DNDGPQDMHV VCRIFQKVGS GPQNGAQYGA 180 PYMEEEWENE DDAIENTPTS GTSTEMLAIT DTASAESNVE DEHIFSGINE RVQTLEVLIP 240 QEIAPLQAIA PPQAQDFNGT GMVSYADGDV PLDEILQEPV SDVSADNTGE PEEQSPLDDH 300 FSLADLSGCP NQDDGYVRQA GPIMFSDPSN GDQAYYPMRT YGNRNHAYRA LSAEEFSDTG 360 NGTNAYSGQQ QACPSDEQNL YSGLHAISTA NG

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MAGSPPPAEE VPMAPGFRFH PTDEELVSYY LLRRVLGRRL RIDAIAEVDL YRLEPWDLPP  60
LSRIRSRDAQ WYFFARLDRK VAGAGAGGRG GPGNRTNRAT PRGYWKTTGK DREVFHRGRA  120
VGMKKTLVFH AGRAPKGDRT NWVMHEYRLL DNDGPQDMHV VCRIFQKVGS GPQNGAQYGA  180
PYMEEEWENE DDAIENTPTS GTSTEMLAIT DTASAESNVE DEHIFSGINE RVQTLEVLIP  240
QEIAPLQAIA PPQAQDFNGT GMVSYADGDV PLDEILQEPV SDVSADNTGE PEEQSPLDDH  300
FSLADLSGCP NQDDGYVRQA GPIMFSDPSN GDQAYYPMRT YGNRNHAYRA LSAEEFSDTG  360
NGTNAYSGQQ QACPSDEQNL YSGLHAISTA NG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-59	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG059650.5