PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG058790.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 301aa    MW: 33972.5 Da    PI: 6.1125
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG058790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.52.1e-122132971699
                       EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  16 lvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        + p +f++e+      +++ kt    + +g+ W  k+ + ++ ++ ++++GW+eF  +ngLk+gD+++F+ +++ ++ l v+++r+
  TRIDC6AG058790.1 213 RTYPVTFCREFaseW-LPAR-KTKNYLQVEGKAWCTKFDVGRGARMSWIRDGWEEFGWENGLKVGDVCLFEAKKKYGRMLIVHLIRS 297
                       455888888887642.2333.456667789********88888899*************************9888888888888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MSGQMFTLVA AADVRYGVSM RREFGSHLEN IAPETEFVKI IARDGVFDFE VIRDDYEPFL  60
SSDGWEEFVD ATNIQEGNSV LFVDRGNFCF KAHIFNPSGH EKSFFFCQRP TEIFGDVPSS  120
TLSDQRVMNG HEAHKANDQP SMNLEDGSPP LSNHVGGPSQ HTSILAQGAT LSTQMKKRVE  180
EKVQAIGSEI PVYVKEMTEI SIIGSKGKGR GCRTYPVTFC REFASEWLPA RKTKNYLQVE  240
GKAWCTKFDV GRGARMSWIR DGWEEFGWEN GLKVGDVCLF EAKKKYGRML IVHLIRSEME  300
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