PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG058420.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 756aa MW: 87115.7 Da PI: 6.2063

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG058420.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.7	1.1e-19	144	228	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6AG058420.4 144 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 228 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
SKGYEKTPAP APACNVVKQA RLDAGKQPVR RPRIQLLSHN REERSAELMD DDEEAAIALS 60 VKLERNASYV DRSLQLVTAE EHDVMEIDDI SSDDTGSQSD SDSSSGSESE KEEGRFFYPA 120 PEALGTVKAP QVGMKFPTLE DAHEYYNTYA LQTGFVVVRG RNYKRQRFQL DCNRNRKVKL 180 VEDLNLKRKR KKNVIEKTNC QAKIIVKLIK GEWVIAAVQN EHNHPLSPSR SFTRFLTSQK 240 HMSPEERSFS RVLQQSRVPP GEILKILRRM SGFFRELPSK EKQALILQSA EQWRKANLDV 300 EKTLNHFEQL QLQDPCFFYT VQKDEDGTLR SIFWTDARSR MDYEIFGDFV SFNTTFSTNR 360 HNMPFVPITG MNSRGRTIVL GCALLQDRKA ETYKWMLETF LQEMGGGQIP RSVITSQDEA 420 MAKAIAEVMP QARHRFCRWN GKAQEKMAAF VAARGNMKAE LDILVDSSLT ETEFEQGWSA 480 LIQRHDASEN EYLQLLWEMR KTWAPVYFMQ DFFPFVVSAR GSQGAFSLFK ENVLPKDKIE 540 NLIEKYEEMQ DKIKKTDEED VLEAATEPSC FSLQPIERHA SRVYTRQIFL KVQKELLHST 600 AFKVQEIERG TLYRLDKAYS YENPEYDRDS FEVSIEPGLT DTYTCQCTKF ARDGILCCHV 660 FRLFTQFGID EIPEKYIVAR WTDGFREEQL ERREEGRLVV AAQREEDAAR YAALMSKAAG 720 IGREICGDGA KCDEFMLELD RIREKMATMA MANDHV

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

SKGYEKTPAP APACNVVKQA RLDAGKQPVR RPRIQLLSHN REERSAELMD DDEEAAIALS  60
VKLERNASYV DRSLQLVTAE EHDVMEIDDI SSDDTGSQSD SDSSSGSESE KEEGRFFYPA  120
PEALGTVKAP QVGMKFPTLE DAHEYYNTYA LQTGFVVVRG RNYKRQRFQL DCNRNRKVKL  180
VEDLNLKRKR KKNVIEKTNC QAKIIVKLIK GEWVIAAVQN EHNHPLSPSR SFTRFLTSQK  240
HMSPEERSFS RVLQQSRVPP GEILKILRRM SGFFRELPSK EKQALILQSA EQWRKANLDV  300
EKTLNHFEQL QLQDPCFFYT VQKDEDGTLR SIFWTDARSR MDYEIFGDFV SFNTTFSTNR  360
HNMPFVPITG MNSRGRTIVL GCALLQDRKA ETYKWMLETF LQEMGGGQIP RSVITSQDEA  420
MAKAIAEVMP QARHRFCRWN GKAQEKMAAF VAARGNMKAE LDILVDSSLT ETEFEQGWSA  480
LIQRHDASEN EYLQLLWEMR KTWAPVYFMQ DFFPFVVSAR GSQGAFSLFK ENVLPKDKIE  540
NLIEKYEEMQ DKIKKTDEED VLEAATEPSC FSLQPIERHA SRVYTRQIFL KVQKELLHST  600
AFKVQEIERG TLYRLDKAYS YENPEYDRDS FEVSIEPGLT DTYTCQCTKF ARDGILCCHV  660
FRLFTQFGID EIPEKYIVAR WTDGFREEQL ERREEGRLVV AAQREEDAAR YAALMSKAAG  720
IGREICGDGA KCDEFMLELD RIREKMATMA MANDHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	193	LKRKRKKN
2	188	192	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-76	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG058420.4