PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG057050.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 354aa MW: 40721.7 Da PI: 9.5277

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG057050.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.4	2.4e-23	82	169	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+ YA+evGFsvr+ +++k ++ + +++fvC +eg r+e ++ + k +r+ + tr+gC+a++ +++++dgk++v+++++ H+H+l TRIDC6AG057050.1 82 FYKMYAHEVGFSVRTWTTHKD--EHGVLWKRFVCAREGWRKEAPEEeRIKPKRKFKLTRCGCEAMIGLRRQDDGKYKVARFVQSHTHQLI 169 ************9998887..5559********999888734566778899*****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MESMTSGALS IGSTTAMGVE DDANSFAMGT IQQVENNENS YHTPTRTSSL PFCGSRYEPE 60 CDPNLQPVIG MQFDTWEEGM TFYKMYAHEV GFSVRTWTTH KDEHGVLWKR FVCAREGWRK 120 EAPEEERIKP KRKFKLTRCG CEAMIGLRRQ DDGKYKVARF VQSHTHQLIS PSKRHLIKSN 180 REVSSELRSK LLTCHKAMVG TSAAYRLLSV EKGGPENVGC TKRDFQNSHR DFKRAIKGAD 240 GQIIVDIMKR VNNHRSCVTF GAAFLWNEKK ESYIWLFKTF LKAMSGVAPK LIMTNEDQSM 300 RIGVEQVFPN TKHRLCMWHI LMKLTEKVGT TMKNNPDFHE RFESQWCLGI RDTK

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MESMTSGALS IGSTTAMGVE DDANSFAMGT IQQVENNENS YHTPTRTSSL PFCGSRYEPE  60
CDPNLQPVIG MQFDTWEEGM TFYKMYAHEV GFSVRTWTTH KDEHGVLWKR FVCAREGWRK  120
EAPEEERIKP KRKFKLTRCG CEAMIGLRRQ DDGKYKVARF VQSHTHQLIS PSKRHLIKSN  180
REVSSELRSK LLTCHKAMVG TSAAYRLLSV EKGGPENVGC TKRDFQNSHR DFKRAIKGAD  240
GQIIVDIMKR VNNHRSCVTF GAAFLWNEKK ESYIWLFKTF LKAMSGVAPK LIMTNEDQSM  300
RIGVEQVFPN TKHRLCMWHI LMKLTEKVGT TMKNNPDFHE RFESQWCLGI RDTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-45	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG057050.1