PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG055920.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 156aa MW: 17205.6 Da PI: 9.2733 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 56.9 | 2.7e-18 | 76 | 109 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C+ kTp+WR gp g+ktLCnaCG++y++ + TRIDC6AG055920.7 76 CMHCQIDKTPQWRAGPLGPKTLCNACGVRYKSGR 109 99*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
AIRAAVPAPE TILVPTPMFS STSSYSEEPE CIAESNSQPK KKKKAKRPTP PVTSDAEGDA 60 DYEEGSGLAP GEVRRCMHCQ IDKTPQWRAG PLGPKTLCNA CGVRYKSGRL FPEYRPAASP 120 TFVPAIHSNS HKKVVEMRQK VEPKGDDLLQ FIRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54810.2 | 4e-41 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG055920.7 |