PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG053700.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 191aa MW: 19433.7 Da PI: 5.2459 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.1 | 6.4e-08 | 13 | 50 | 13 | 55 |
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC6AG053700.3 13 RERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 50 89***************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
GRPPTPTASP SVRERIAERM KALQELVPNA NKTDKASMLD EIIDYVKFLQ LQVKVLSMSR 60 LGGAAAVGPL VAGLSSESSG NGNGTSSSGD GNGDDDNGGS TLRATEQQVA RLMEEDMGTA 120 MQYLQGKGLC LMPISLASVI SSATSSSLRS ATRPAGNAGG PLHEGGSPAS PRLVNSMGTD 180 GSRTIGDGSG Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24260.1 | 6e-41 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG053700.3 |