PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG053700.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 264aa    MW: 27128.5 Da    PI: 10.0911
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG053700.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.12.9e-1278123555
                       HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  TRIDC6AG053700.2  78 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 123
                       99***********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
PCSPATASMA GGSCRCRCSL TGRGRTCRGP TRRCSTVCLL SPRTSKAGSM PPPAAQGGAA  60
APPRQRQRAR RGQATDPHSI AERLRRERIA ERMKALQELV PNANKTDKAS MLDEIIDYVK  120
FLQLQVKVLS MSRLGGAAAV GPLVAGLSSE SSGNGNGTSS SGDGNGDDDN GGSTLRATEQ  180
QVARLMEEDM GTAMQYLQGK GLCLMPISLA SVISSATSSS LRSATRPAGN AGGPLHEGGS  240
PASPRLVNSM GTDGSRTIGD GSGQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18388RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.16e-37bHLH family protein