PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG053700.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 357aa MW: 36761.9 Da PI: 5.4025

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG053700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.5e-12	171	216	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC6AG053700.1 171 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 216 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MQPAGREMHG GGQGQGQDDF FEQMLSALPT AWAELGSVRP PWELQAAGAP PPDGDPAFDE 60 SALLASRLRH NQISGGGGDD KPPPAMLPRH GLDGGGFLPL PLFTDRSRED LQGANQALFD 120 GFGAAGMHAA AAAQPPFGQA GSMPPPAAQG GAAAPPRQRQ RARRGQATDP HSIAERLRRE 180 RIAERMKALQ ELVPNANKTD KASMLDEIID YVKFLQLQVK VLSMSRLGGA AAVGPLVAGL 240 SSESSGNGNG TSSSGDGNGD DDNGGSTLRA TEQQVARLME EDMGTAMQYL QGKGLCLMPI 300 SLASVISSAT SSSLRSATRP AGNAGGPLHE GGSPASPRLV NSMGTDGSRT IGDGSGQ

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MQPAGREMHG GGQGQGQDDF FEQMLSALPT AWAELGSVRP PWELQAAGAP PPDGDPAFDE  60
SALLASRLRH NQISGGGGDD KPPPAMLPRH GLDGGGFLPL PLFTDRSRED LQGANQALFD  120
GFGAAGMHAA AAAQPPFGQA GSMPPPAAQG GAAAPPRQRQ RARRGQATDP HSIAERLRRE  180
RIAERMKALQ ELVPNANKTD KASMLDEIID YVKFLQLQVK VLSMSRLGGA AAVGPLVAGL  240
SSESSGNGNG TSSSGDGNGD DDNGGSTLRA TEQQVARLME EDMGTAMQYL QGKGLCLMPI  300
SLASVISSAT SSSLRSATRP AGNAGGPLHE GGSPASPRLV NSMGTDGSRT IGDGSGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	181	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	3e-35	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG053700.1