PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG050100.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 312aa MW: 33158 Da PI: 7.1802

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG050100.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	89	140	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ + Lr+l+P + + + + a+i A++Y+k+L+ TRIDC6AG050100.2 89 QRMTHITVERNRRKQMNEYLGVLRSLMPAS---YVHRGDQASIIGGAINYVKELE 140 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
ALEAVVFSKG FFGRCAMAAE GVGGGGGVWG GNEHGHGGGV ELDGSNAHCG AAVASASGAV 60 GAASASGAAG RRKRRRARSV KNIEEAESQR MTHITVERNR RKQMNEYLGV LRSLMPASYV 120 HRGDQASIIG GAINYVKELE QLVQSLEAHR HARLRDDCPV SGDVDSAAAV PFVDFFTFPQ 180 YTMSVRHAPA TPAADASADG SGGNADNDGT SGSKQSAVAD IEVTIVESHA SLKVLSRRRP 240 RQLLRIVAGL QGHRLAVLHL NATSAGHMAL YCLSLKQVED DCRLSSVDDI AAAVHRIVET 300 IEREEEEEER RR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	76	RKRRR
2	90	101	RMTHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	9e-64	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG050100.2