PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG050080.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 191aa    MW: 20765.5 Da    PI: 10.8448
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG050080.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.54.5e-333591158
         CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                      dep++VN+KQy++Il+RRq Rakle+++kl +k+rkpylheSRh hA++R+RgsgGrF
  TRIDC6AG050080.7 35 DEPIFVNPKQYNGILRRRQLRAKLEAQNKL-TKNRKPYLHESRHLHAMKRARGSGGRF 91
                      79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
IYCCCGSVIA FQPLMAGGGA SATARVPLPV ELAADEPIFV NPKQYNGILR RRQLRAKLEA  60
QNKLTKNRKP YLHESRHLHA MKRARGSGGR FLNSKQLKQQ QQSGSACTKA IADGANSLGS  120
THLRLGSGPA GDRTNSVSKA MSSQENSKRV AAPAPAFTMI QAARKDDDFF HHHAHHLSFS  180
GHFGQSSDRY T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.12e-34NF-YA family protein