PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG050080.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 254aa    MW: 27638 Da    PI: 10.5735
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG050080.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.87.5e-3398154158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       dep++VN+KQy++Il+RRq Rakle+++kl +k+rkpylheSRh hA++R+RgsgGrF
  TRIDC6AG050080.5  98 DEPIFVNPKQYNGILRRRQLRAKLEAQNKL-TKNRKPYLHESRHLHAMKRARGSGGRF 154
                       79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
CFSPLLRLPP TTPKGDSFGK SVDDHMRSTL TFGDKHSVYA GQNTDYGHPM ACISYPFNDS  60
GSGVWAAYGS RAMFQPLMAG GGASATARVP LPVELAADEP IFVNPKQYNG ILRRRQLRAK  120
LEAQNKLTKN RKPYLHESRH LHAMKRARGS GGRFLNSKQL KQQQQSGSAC TKAIADGANS  180
LGSTHLRLGS GPAGDRTNSV SKAMSSQENS KRVAAPAPAF TMIQAARKDD DFFHHHAHHL  240
SFSGHFGQSS DRYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.17e-34NF-YA family protein