PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG047440.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 264aa    MW: 28949 Da    PI: 11.0325
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG047440.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.81.9e-1375126155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +rr+h ++Er+RR+++N+ ++ Lr+ +P++   ++++ + a+i+  A++++k+L+
  TRIDC6AG047440.3  75 QRRNHIAVERNRRRQMNDYLAVLRSSMPPS---YAQRGDQASIVAGAINFVKELE 126
                       79****************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
ILWRWKPWCS RMSTSPAAVE GNWDENHCRP VSPPAAVAPT TPAASGRGKA SSSAAARRRR  60
RRPKAVKNRE ETESQRRNHI AVERNRRRQM NDYLAVLRSS MPPSYAQRGD QASIVAGAIN  120
FVKELEQLLQ SLEAQKRRRA QLASTPPFAG FFTFPQYSVG AGAGAADGSG ARRGVADVEV  180
AVAESHASVK VLAPRRPRQL VRMVVAMQCL GLTVLHLNAT ATADHLVFYS FSLRMEDECR  240
LSTVDEIAAA VHQMVAEVHA RGPC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15762RRRRRR
27787RNHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-48bHLH family protein