PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG047440.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 310aa MW: 33552.1 Da PI: 8.9843

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG047440.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.4	2.5e-13	121	172	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +rr+h ++Er+RR+++N+ ++ Lr+ +P++ ++++ + a+i+ A++++k+L+ TRIDC6AG047440.2 121 QRRNHIAVERNRRRQMNDYLAVLRSSMPPS---YAQRGDQASIVAGAINFVKELE 172 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
LDPMALEAVV FPHEHLACST DKVAAAMSMY APSLGRGISI VDEFEEKGGV VLQEEAANYA 60 WAAAVEGNWD ENHCRPVSPP AAVAPTTPAA SGRGKASSSA AARRRRRRPK AVKNREETES 120 QRRNHIAVER NRRRQMNDYL AVLRSSMPPS YAQRGDQASI VAGAINFVKE LEQLLQSLEA 180 QKRRRAQLAS TPPFAGFFTF PQYSVGAGAG AADGSGARRG VADVEVAVAE SHASVKVLAP 240 RRPRQLVRMV VAMQCLGLTV LHLNATATAD HLVFYSFSLR MEDECRLSTV DEIAAAVHQM 300 VAEVHARGPC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	108	RRRRRR
2	123	133	RNHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	8e-48	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG047440.2