PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6AG046900.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 381aa MW: 42518 Da PI: 8.2964

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG046900.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	57.2	2.8e-18	1	58	9	71
E2F_TDP 9 ltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 l+++f++l+ + + + l++++++L v +rRRiYDi+NVLe+++++++k+kn+++w+g TRIDC6AG046900.2 1 LCSNFVALYDRDGVESIGLDDASRRL---GV--ERRRIYDIVNVLESVGILARKAKNRYSWIG 58 799******999********.....****************************98 PP
2	E2F_TDP	76.6	2.5e-24	137	217	1	71
E2F_TDP 1 rkeksLrlltqkflklleksee.givtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwkg 71 rkeksL+lltq+f+kl+ + e+ +++l+e+ak L+ e ++++k+RR+YDi+NVL++l+liek ++k+++ w g TRIDC6AG046900.2 137 RKEKSLGLLTQNFVKLFLTMEQvSTISLDEAAKFLLGEgheesNMRTKVRRLYDIANVLSSLKLIEKtqvdTRKPAFWWLG 217 79***************9999******************************************99999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
LCSNFVALYD RDGVESIGLD DASRRLGVER RRIYDIVNVL ESVGILARKA KNRYSWIGFG 60 GVPMALRELK ERALREKSGL APLPAEELSA ANMSDDEDDD KLGDPEAERE GEKLSQTVDN 120 PSDMPDAPPC RLRSDHRKEK SLGLLTQNFV KLFLTMEQVS TISLDEAAKF LLGEGHEESN 180 MRTKVRRLYD IANVLSSLKL IEKTQVDTRK PAFWWLGMAG KPKAENGVTI VASPARKTLS 240 NKRVFGTELT NIGINRSQLE PTTQKKAKLA QGGADILKSY NVAAQKQPGQ VNKSGFVYGP 300 FHPSCARKQE PDDCNNVGQR AIAHDWESLA DSFRPQYQNP ALGDLFAHYV DSWKSWYSEF 360 SQGSSIMQQH LGSSVNNKRF L

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

LCSNFVALYD RDGVESIGLD DASRRLGVER RRIYDIVNVL ESVGILARKA KNRYSWIGFG  60
GVPMALRELK ERALREKSGL APLPAEELSA ANMSDDEDDD KLGDPEAERE GEKLSQTVDN  120
PSDMPDAPPC RLRSDHRKEK SLGLLTQNFV KLFLTMEQVS TISLDEAAKF LLGEGHEESN  180
MRTKVRRLYD IANVLSSLKL IEKTQVDTRK PAFWWLGMAG KPKAENGVTI VASPARKTLS  240
NKRVFGTELT NIGINRSQLE PTTQKKAKLA QGGADILKSY NVAAQKQPGQ VNKSGFVYGP  300
FHPSCARKQE PDDCNNVGQR AIAHDWESLA DSFRPQYQNP ALGDLFAHYV DSWKSWYSEF  360
SQGSSIMQQH LGSSVNNKRF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-95	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG046900.2