PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG046900.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 380aa    MW: 42389.9 Da    PI: 8.2964
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG046900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP57.22.8e-18158971
           E2F_TDP  9 ltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                      l+++f++l+ +   + + l++++++L    v  +rRRiYDi+NVLe+++++++k+kn+++w+g
  TRIDC6AG046900.1  1 LCSNFVALYDRDGVESIGLDDASRRL---GV--ERRRIYDIVNVLESVGILARKAKNRYSWIG 58
                      799********999************...**..****************************98 PP
2E2F_TDP75.94.1e-24137216171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwkg 71 
                       rkeksL+lltq+f+kl+ + e  +++l+e+ak L+ e     ++++k+RR+YDi+NVL++l+liek    ++k+++ w g
  TRIDC6AG046900.1 137 RKEKSLGLLTQNFVKLFLTMEVSTISLDEAAKFLLGEgheesNMRTKVRRLYDIANVLSSLKLIEKtqvdTRKPAFWWLG 216
                       79****************************************************************99999999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
LCSNFVALYD RDGVESIGLD DASRRLGVER RRIYDIVNVL ESVGILARKA KNRYSWIGFG  60
GVPMALRELK ERALREKSGL APLPAEELSA ANMSDDEDDD KLGDPEAERE GEKLSQTVDN  120
PSDMPDAPPC RLRSDHRKEK SLGLLTQNFV KLFLTMEVST ISLDEAAKFL LGEGHEESNM  180
RTKVRRLYDI ANVLSSLKLI EKTQVDTRKP AFWWLGMAGK PKAENGVTIV ASPARKTLSN  240
KRVFGTELTN IGINRSQLEP TTQKKAKLAQ GGADILKSYN VAAQKQPGQV NKSGFVYGPF  300
HPSCARKQEP DDCNNVGQRA IAHDWESLAD SFRPQYQNPA LGDLFAHYVD SWKSWYSEFS  360
QGSSIMQQHL GSSVNNKRFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.28e-94E2F/DP family protein