PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG046110.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 385aa MW: 38737.7 Da PI: 9.4683

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG046110.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	135.3	5.5e-42	60	236	2	137
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ TRIDC6AG046110.2 60 VPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSLSIPahlrg 152 689****************************************************************999989999999998888899999 PP TCP 89 ..............................kaaksaa.kskksqksaasalnlakesrakarar....are.rtrekmriknkln 137 + ++s++ + + +s + l+++ + +a a a +r+ r++++m+++++++ TRIDC6AG046110.2 153 alpspgvrfgsradawdrvvglgyppegpaS-SSSTPsPLLLNFHSGSVGLDVQPSPSAAAAAAaadlSRKrRWEQEMQQQQQQQ 236 99999*********************953.44444477888888888888888666444444355666657777777776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MDIAGDAGGG RRPNFPLQLL EKKEEQPCSS SAAGGTSGGG GNGAAAGGAA GGEMQVRKAV 60 PKRTSTKDRH TKVEGRGRRI RMPALCAARV FQLTRELGHK TDGETIEWLL QQAEPAVIAA 120 TGTGTIPANF TSLNISLRSS GSSLSIPAHL RGALPSPGVR FGSRADAWDR VVGLGYPPEG 180 PASSSSTPSP LLLNFHSGSV GLDVQPSPSA AAAAAAADLS RKRRWEQEMQ QQQQQQHHQQ 240 QQQQQYQQQM AGYTGAPSGG GNGGGGGGSG ESIWTFPQVG SAGAAAAVYR GSVPSGLHFM 300 NFPTPMALLP GQQLGLGPVG GSGGGAGGTE GQMGILAALN AYRTQAAEAA AGQGGGGGGG 360 SSSQQQHGGG GGGGERHESM STSES

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MDIAGDAGGG RRPNFPLQLL EKKEEQPCSS SAAGGTSGGG GNGAAAGGAA GGEMQVRKAV  60
PKRTSTKDRH TKVEGRGRRI RMPALCAARV FQLTRELGHK TDGETIEWLL QQAEPAVIAA  120
TGTGTIPANF TSLNISLRSS GSSLSIPAHL RGALPSPGVR FGSRADAWDR VVGLGYPPEG  180
PASSSSTPSP LLLNFHSGSV GLDVQPSPSA AAAAAAADLS RKRRWEQEMQ QQQQQQHHQQ  240
QQQQQYQQQM AGYTGAPSGG GNGGGGGGSG ESIWTFPQVG SAGAAAAVYR GSVPSGLHFM  300
NFPTPMALLP GQQLGLGPVG GSGGGAGGTE GQMGILAALN AYRTQAAEAA AGQGGGGGGG  360
SSSQQQHGGG GGGGERHESM STSES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-45	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG046110.2