PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG044800.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 262aa MW: 28051.4 Da PI: 5.1661 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +G +W+++++ g+ R++k+c++rw +yl TRIDC6AG044800.2 14 KGPWTAEEDQKLVAFLLSHGHCCWRLVPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 54 | 3.8e-17 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + +E++l +d++ qlG++ W++Ia++++ gRt++++k++w+++ TRIDC6AG044800.2 70 LSDDEEKLVIDLHSQLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 589****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGRQPCCEKV GLKKGPWTAE EDQKLVAFLL SHGHCCWRLV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SDDEEKLVID LHSQLGNRWS KIAARLPGRT DNEIKNHWNT HIRKKLKKMG 120 LDPVTHQPVA ASRADPLEDL QQEHCDDKAS SQESAGSGTG AGAEEEAPTS AEPKQGAACS 180 ASTASAVSPS PCSSSSASAS ASAATPGGGD VDWPDPLDLF QVDAIIDMDW ASILSGSGGG 240 GDIGVDLFDQ CSDVGFDQEV WM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66230.1 | 2e-82 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG044800.2 |