PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG044000.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 383aa    MW: 41825.2 Da    PI: 7.2119
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG044000.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.49.4e-17133182255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r +h++ E+rRR +iN++++ Lr+llP++    ++K +Ka+ L +++eYI+ Lq
  TRIDC6AG044000.4 133 RSKHSATEQRRRTKINDRLDILRDLLPNC----DQKRDKASFLLEVIEYIRLLQ 182
                       889*************************9....9*****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
PFHLQLPGWC PKSLEPASGG GTAGGAAGLG QHVLPGGVGT FSIRQLPDAQ PREEAGTGRE  60
PSVSVSHGSR METAHEARSG IMVRSAPPTP AMWQDSSTDN KRSRDTDCCE CSGSRAEGRS  120
SGSSADQDPS SPRSKHSATE QRRRTKINDR LDILRDLLPN CDQKRDKASF LLEVIEYIRL  180
LQEKCQKYES GIPEQNDVDA NCMPWDKVYY RSRWRNTQNI SQVQGGGLSA TTEEDMNKEQ  240
YSSKGIASAP AASLFNTQSA REISTAPSSS QNIAENSMPT NQLPWLSMST MNQNCDASNG  300
LLSKHDTQMP QDDSQSLSSA YSQGLLHKLK EALQRSGVDP SQTKISIEIN MDRRARANAH  360
IHDSSKANEG KEPVPVAKRL RCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-31bHLH family protein