PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG041310.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 271aa MW: 29826 Da PI: 9.2439

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG041310.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	25	79	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LHerFveav++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYR+ TRIDC6AG041310.2 25 KPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRM 79 79****************************************************7 PP
2	Myb_DNA-binding	69.8	4.4e-22	27	78	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++v+av++lGg+ t+k++ r mg kg+tl+++ks++qky+ TRIDC6AG041310.2 27 RLRWTPDLHERFVEAVTKLGGPdkaTPKSVLRLMGmKGLTLYHLKSHLQKYR 78 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
IIMFEGMERA GYGVGAGVVL SRDPKPRLRW TPDLHERFVE AVTKLGGPDK ATPKSVLRLM 60 GMKGLTLYHL KSHLQKYRMG KQSKKDTGFE TNRGAFAAQG ISFSSAMPPN VPSAGNNTTG 120 ETPLADALRY QIEVQRKLHE QLEVQKKLQM RIEAQGKYLQ TILEKAQKNL SYEAGGDATL 180 ETTRSQLTDF NLALSGFMDD ATQACQQNGG ELAKALSDDG LRAGNLGFQL YHGGEDVKCA 240 TDEDLLLLDL NIKGGYDHRL SAQLRISVAR R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	1e-66	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG041310.2