PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC6AG041270.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 459aa MW: 50923.1 Da PI: 5.2011

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG041270.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.7e-13	261	307	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +a+ + E+ RR++iN ++ Lr+llP++ +K++ a+i+ A+eYI++L TRIDC6AG041270.4 261 KANFATEKERREQINVKYGALRSLLPSP-----TKNDRASIVGDAIEYINEL 307 68999*********************.....9*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MIAEGGYFDG SRDAILMAGS LIHDSLDSIC DSTEIAQGNF HGPSFFIEDI CNPTNLTSEP 60 ARTINHIQHR AEFDMDQDLH GHMIQETQVE TSNWVPAMFG TQNHIISQQS IEQQMDDYDA 120 ASYPDGAHTT APDLLNLLQI PRYSMTTAFP STEHIFGDPG QNAGNQLDIN NDVLGRAIHD 180 SGMMLGDLTL PLQYNGNQSH LFKDLYHSLP QSFGLFSSDD ERDRTMGVVG AAGNILQEID 240 GRQFGSPKLG RSKKGGFGKA KANFATEKER REQINVKYGA LRSLLPSPTK NDRASIVGDA 300 IEYINELNRT LKELTSLVEG DTKHRMKMLK LDDAARDNGE SSSLQQVKDD QDSQLNGAIR 360 SSWIQRRSKE CHVDVRIVGN EINIKFTEKK KTNSLLCAAK VIDEFRLELI HVVGGIIGDQ 420 RIFMFNTKIS EGSSVYASAL ASKLLRAMEM EHLAVDIFS

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MIAEGGYFDG SRDAILMAGS LIHDSLDSIC DSTEIAQGNF HGPSFFIEDI CNPTNLTSEP  60
ARTINHIQHR AEFDMDQDLH GHMIQETQVE TSNWVPAMFG TQNHIISQQS IEQQMDDYDA  120
ASYPDGAHTT APDLLNLLQI PRYSMTTAFP STEHIFGDPG QNAGNQLDIN NDVLGRAIHD  180
SGMMLGDLTL PLQYNGNQSH LFKDLYHSLP QSFGLFSSDD ERDRTMGVVG AAGNILQEID  240
GRQFGSPKLG RSKKGGFGKA KANFATEKER REQINVKYGA LRSLLPSPTK NDRASIVGDA  300
IEYINELNRT LKELTSLVEG DTKHRMKMLK LDDAARDNGE SSSLQQVKDD QDSQLNGAIR  360
SSWIQRRSKE CHVDVRIVGN EINIKFTEKK KTNSLLCAAK VIDEFRLELI HVVGGIIGDQ  420
RIFMFNTKIS EGSSVYASAL ASKLLRAMEM EHLAVDIFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	4e-49	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG041270.4