PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG040550.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 298aa MW: 32035.2 Da PI: 8.37

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG040550.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.2	2.5e-12	89	140	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i+ A++++k+L+ TRIDC6AG040550.3 89 QRMTHIAVERNRRRQMNEYLVVLRSLMPVS---YVQRGDQASIVGGAIDFVKELE 140 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MALVDALCAS SVDNAALVYS TFNAAGFLFD NAAGFYDGAG IAGAPAHEPQ AADVAAPAEK 60 QATSSPAPPR RKRRRRARSC KSREETECQR MTHIAVERNR RRQMNEYLVV LRSLMPVSYV 120 QRGDQASIVG GAIDFVKELE QQLQSLEAQK RALAHQQQQH KAGRDAAPLP ARASTSGGIG 180 NACVESTSNC SSSVTEADGA PDAPPFAGFF TYPQYVWRQS PRDATTLSAD ESRAGVADVE 240 VNLVETHASL RVMAPRRPGQ LLRMVAGLQA LRLAVLHLNV TALDALVLYS LSLKCDTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	76	RRKRRRR
2	71	75	RKRRR
3	71	78	RKRRRRAR
4	90	101	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	7e-49	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG040550.3