PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG038690.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 237aa    MW: 24512 Da    PI: 6.0221
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG038690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-1860109255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  TRIDC6AG038690.1  60 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAALAIKG 109
                       69****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
PTTNSTTTVS SAMGATEDSS SGSETTTSSS AEALAAPPSP TATTASSKKK RPRNDGRHPT  60
YRGVRMRSWG KWVSEIREPR KKSRIWLGTF ATAEMAARAH DVAALAIKGR AAHLNFPDLA  120
HELPRPATAA PKDVQAAAAL AASADFPASA TAAANAGAKN PDGPEPSAAS ASASASASAP  180
PDTAEDALFD LPDLLFDLRH GPPSCQLSCA SSWDDDVAFA GPGAGVFRLE EPLQWEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-40ERF family protein