PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG038650.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 264aa    MW: 27771.6 Da    PI: 5.1955
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG038650.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-18101151155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g
  TRIDC6AG038650.1 101 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAAVAIKG 151
                       57*****887.**********843...6*********************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
PSLEPCLVLV ERSRAMESDT IHAPATSSSS SYSSDSAVIN GAQDVSKGEP KHLKRKRQTA  60
TSPAAPATGS QEAESADGAA RGEESSSCAA AADERTAGRH PSYRGVRRRS WGKWVSEIRE  120
PRKKSRIWLG TFPTAEMAAR AHDVAAVAIK GRRAHLNFPH LADALPRPAS TSPADIQAAA  180
ALAAAQCEPP SSVAETTETP TTSTETSAAS SGTAGCGEEN ALFDLPDLLL DLRDGLWCSP  240
TWATAADEYD GGEAALHEPL LWVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-32ERF family protein