PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG038300.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 314aa MW: 32982.9 Da PI: 7.9671 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.1 | 6.6e-05 | 5 | 26 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ C ++F ++ L H+r+H TRIDC6AG038300.2 5 TCKLCFRRFASPRALAGHMRSH 26 6********************9 PP | |||||||
2 | zf-C2H2 | 10.6 | 0.0018 | 239 | 260 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +Cp+C ++F + L H r+H TRIDC6AG038300.2 239 ECPYCYRVFASGQALGGHKRSH 260 5*****************9999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MAKNTCKLCF RRFASPRALA GHMRSHSVRN PAAKQQISSA SSASTSFTAA ADGDVSFKKP 60 LPIYALRENP KRNLRVTDVA FSDRESEAES TPPHPKRAHA AAAGGETEPL SSVSDAATPE 120 EDVALSLMML SRDSWPSTGR GYGDGDYSDD GSDGGYTLPA PDPAPVEKRT RFQCGACKKV 180 FRSYQALGGH RASHVRGGRG GCCAPPIAPP PPPPQPLAPA PLMEREGDED MDGKGSPREC 240 PYCYRVFASG QALGGHKRSH VCSAAAAAAQ AHAAAAPPAP IKAFGMIDLN IALPFEDVEL 300 SAVSDPRFSS NPGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02030.1 | 2e-31 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG038300.2 |