PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG033760.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 804aa MW: 90642.7 Da PI: 8.7151

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG033760.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.7	1.6e-17	44	127	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++++s+ s ++g++ +++C k g+++ e k r+ra++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6AG033760.7 44 RFYRRYARRVGFGVSVRRSSFS-QEGTCLYLELMCCKGGRPRYEPKF-----RKRASSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 127 5***************9999.6677************9988.....99*******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MVGSAASYKN QMENIDPYLE ESDGQDIGIP EVGMVFNNHM EVNRFYRRYA RRVGFGVSVR 60 RSSFSQEGTC LYLELMCCKG GRPRYEPKFR KRASSTTNCP ARIRVKLWGD KLLHVELANL 120 DHNHPVSPAM ARFLNSYKQL SGPAKRRLRM GGPGAMPVEE PSKMPVDKLG ALEELLFGES 180 KNHSFVERGR LKLQPGDSEA LRLFFTRMQA KNANFFNVID LDDEGCVRNV FWADAWSRAM 240 YEYYNDAITL DTSYVVSKHD MPLVTFLGVN HHGQSVLLGC GLLSDETAET YTWLFKAWVA 300 CMSGNLPKAI ITDQCRGIQS AVAEVVPGVR HRICLHQIMK KAAEQLSGLS EYKAISKALQ 360 KAAYDSLTVD EFEGEWSTLI TYNGLQGHDW LRSLYECRFS WVPIFLKDAF WAGMSATQRS 420 ETITPFFEGY VDLKTSLKQF LGKYEMILQS KYEKEAQADF ETFHKQRPPV SKFYMEEQLS 480 KVYTHNMFKK LQDEIEAIMY CHVSLMNGDG PISTFNVKEC IFLEDGKRTM SKIFAVTYNT 540 EEKDITCICG GFQFSGILCR HSLSVLKFQQ VREVPSQYVL DRWKKDFRQL HVMGRLSSDV 600 VPDNRVDRYD YLSMRCLQLV DSAVLSDKYR LALRLVREVE KFLLNSNTHD DTQPRIKSRI 660 PKVKPNTVTG QNLVNVVTDN GNGGPKGPEA SASAQASQIQ KGVAEKAVVP AGYIGVPANV 720 QQFMGNQAAM RPSIVYMVPS GVDPQAFGNG VLMPVMYQQM FQIPQQPNGA AQDTLANGKR 780 KRPRAQKPTE TSHQSNGTSG PAAG

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MVGSAASYKN QMENIDPYLE ESDGQDIGIP EVGMVFNNHM EVNRFYRRYA RRVGFGVSVR  60
RSSFSQEGTC LYLELMCCKG GRPRYEPKFR KRASSTTNCP ARIRVKLWGD KLLHVELANL  120
DHNHPVSPAM ARFLNSYKQL SGPAKRRLRM GGPGAMPVEE PSKMPVDKLG ALEELLFGES  180
KNHSFVERGR LKLQPGDSEA LRLFFTRMQA KNANFFNVID LDDEGCVRNV FWADAWSRAM  240
YEYYNDAITL DTSYVVSKHD MPLVTFLGVN HHGQSVLLGC GLLSDETAET YTWLFKAWVA  300
CMSGNLPKAI ITDQCRGIQS AVAEVVPGVR HRICLHQIMK KAAEQLSGLS EYKAISKALQ  360
KAAYDSLTVD EFEGEWSTLI TYNGLQGHDW LRSLYECRFS WVPIFLKDAF WAGMSATQRS  420
ETITPFFEGY VDLKTSLKQF LGKYEMILQS KYEKEAQADF ETFHKQRPPV SKFYMEEQLS  480
KVYTHNMFKK LQDEIEAIMY CHVSLMNGDG PISTFNVKEC IFLEDGKRTM SKIFAVTYNT  540
EEKDITCICG GFQFSGILCR HSLSVLKFQQ VREVPSQYVL DRWKKDFRQL HVMGRLSSDV  600
VPDNRVDRYD YLSMRCLQLV DSAVLSDKYR LALRLVREVE KFLLNSNTHD DTQPRIKSRI  660
PKVKPNTVTG QNLVNVVTDN GNGGPKGPEA SASAQASQIQ KGVAEKAVVP AGYIGVPANV  720
QQFMGNQAAM RPSIVYMVPS GVDPQAFGNG VLMPVMYQQM FQIPQQPNGA AQDTLANGKR  780
KRPRAQKPTE TSHQSNGTSG PAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-135	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG033760.7