PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG033760.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 794aa MW: 89590.6 Da PI: 8.7188

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG033760.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.7	1.6e-17	34	117	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++++s+ s ++g++ +++C k g+++ e k r+ra++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6AG033760.5 34 RFYRRYARRVGFGVSVRRSSFS-QEGTCLYLELMCCKGGRPRYEPKF-----RKRASSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 117 5***************9999.6677************9988.....99*******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 794 aa Download sequence
MMVNPDPYLE ESDGQDIGIP EVGMVFNNHM EVNRFYRRYA RRVGFGVSVR RSSFSQEGTC 60 LYLELMCCKG GRPRYEPKFR KRASSTTNCP ARIRVKLWGD KLLHVELANL DHNHPVSPAM 120 ARFLNSYKQL SGPAKRRLRM GGPGAMPVEE PSKMPVDKLG ALEELLFGES KNHSFVERGR 180 LKLQPGDSEA LRLFFTRMQA KNANFFNVID LDDEGCVRNV FWADAWSRAM YEYYNDAITL 240 DTSYVVSKHD MPLVTFLGVN HHGQSVLLGC GLLSDETAET YTWLFKAWVA CMSGNLPKAI 300 ITDQCRGIQS AVAEVVPGVR HRICLHQIMK KAAEQLSGLS EYKAISKALQ KAAYDSLTVD 360 EFEGEWSTLI TYNGLQGHDW LRSLYECRFS WVPIFLKDAF WAGMSATQRS ETITPFFEGY 420 VDLKTSLKQF LGKYEMILQS KYEKEAQADF ETFHKQRPPV SKFYMEEQLS KVYTHNMFKK 480 LQDEIEAIMY CHVSLMNGDG PISTFNVKEC IFLEDGKRTM SKIFAVTYNT EEKDITCICG 540 GFQFSGILCR HSLSVLKFQQ VREVPSQYVL DRWKKDFRQL HVMGRLSSDV VPDNRVDRYD 600 YLSMRCLQLV DSAVLSDKYR LALRLVREVE KFLLNSNTHD DTQPRIKSRI PKVKPNTVTG 660 QNLVNVVTDN GNGGPKGPEA SASAQASQIQ KGVAEKAVVP AGYIGVPANV QQFMGNQAAM 720 RPSIVYMVPS GVDPQAFGNG VLMPVMYQQM FQIPQQPNGA AQDTLANGKR KRPRAQKPTE 780 TSHQSNGTSG PAAG

Sequence ? help Back to Top

Protein Sequence Length: 794 aa Download sequence

MMVNPDPYLE ESDGQDIGIP EVGMVFNNHM EVNRFYRRYA RRVGFGVSVR RSSFSQEGTC  60
LYLELMCCKG GRPRYEPKFR KRASSTTNCP ARIRVKLWGD KLLHVELANL DHNHPVSPAM  120
ARFLNSYKQL SGPAKRRLRM GGPGAMPVEE PSKMPVDKLG ALEELLFGES KNHSFVERGR  180
LKLQPGDSEA LRLFFTRMQA KNANFFNVID LDDEGCVRNV FWADAWSRAM YEYYNDAITL  240
DTSYVVSKHD MPLVTFLGVN HHGQSVLLGC GLLSDETAET YTWLFKAWVA CMSGNLPKAI  300
ITDQCRGIQS AVAEVVPGVR HRICLHQIMK KAAEQLSGLS EYKAISKALQ KAAYDSLTVD  360
EFEGEWSTLI TYNGLQGHDW LRSLYECRFS WVPIFLKDAF WAGMSATQRS ETITPFFEGY  420
VDLKTSLKQF LGKYEMILQS KYEKEAQADF ETFHKQRPPV SKFYMEEQLS KVYTHNMFKK  480
LQDEIEAIMY CHVSLMNGDG PISTFNVKEC IFLEDGKRTM SKIFAVTYNT EEKDITCICG  540
GFQFSGILCR HSLSVLKFQQ VREVPSQYVL DRWKKDFRQL HVMGRLSSDV VPDNRVDRYD  600
YLSMRCLQLV DSAVLSDKYR LALRLVREVE KFLLNSNTHD DTQPRIKSRI PKVKPNTVTG  660
QNLVNVVTDN GNGGPKGPEA SASAQASQIQ KGVAEKAVVP AGYIGVPANV QQFMGNQAAM  720
RPSIVYMVPS GVDPQAFGNG VLMPVMYQQM FQIPQQPNGA AQDTLANGKR KRPRAQKPTE  780
TSHQSNGTSG PAAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-134	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG033760.5