PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG032930.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 863aa    MW: 95458.3 Da    PI: 8.5837
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG032930.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.14.2e-102483261698
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       l +p k a + +++  +++ + led++g+s  v+l  +  +g+  + +GW++Fv+++ +k  ++++F+++g s+f   v+vf 
  TRIDC6AG032930.4 248 LLIPPKPAGASKMVGLTNQLVCLEDSEGKSSMVRL--SVVDGSLAFYQGWSNFVSDHSIKWAEIILFEYTGCSKF--SVRVFG 326
                       56666665555444455678***************..8888999999**********************986777..888875 PP
2B336.96.7e-127778551391
                       TT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
                B3  13 sgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                       + rl lp +  ++              ++l+d+  r W v +    +s  + +t+GWk+Fv an+L++gD +v+ +d + +e  
  TRIDC6AG032930.4 777 QTRLELPDPLSNAVgrkgR---LDRNIVMLKDPMKRLWPVFY--HETSLFVGFTGGWKSFVAANKLEAGDLCVLLMDLDeDELV 855
                       4567777777766654322...233469999***********..******************************9875534444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 863 aa     Download sequence    
GSLEKGRRME EPIELSDDAD DNETIMEMSK KAGKHKEKRR RHNDDGDHKK KKKSVSSHGG  60
DKNTHSADRD KDKRRDMLLS PNKNKDPFHS KEKSRTMPSS HGGDGKMHPG DHHNDNKSST  120
MWRSEYDKYK GIPKKEMKKD KKPWPVHNGG SREEEKKKTV LVLSKEGKMP VLDNSSNKGN  180
KWKKTPMLYD KVKKPRTSDK DDKAGSYDRK KTTPGYNAGH KVQSGHGEKK KVKFAFFKVA  240
GEHFEEFLLI PPKPAGASKM VGLTNQLVCL EDSEGKSSMV RLSVVDGSLA FYQGWSNFVS  300
DHSIKWAEII LFEYTGCSKF SVRVFGADSW ERVSFTVETR GEEKKQKESY APDDLAPCRC  360
SRDINGHHYV SGEYTRSNRP KTKSDGYTDN AEVSPGNLVA KSANAVPGTR RMSANSIEDP  420
NGVVGGIVGG SSMAPDNKDG HLANGKHTGN AIFPSYIKAT TRSPETVVIA DEAPLAQENK  480
DTVALDNKEA NLTIGECKTK CNASITCNNE KATRLDLVPV TIDAAPLSQE NGDAVELMTF  540
AGHIEDAVMM KESTSAKCAE IHGSDEDLRR KQEGNTVRLE CTAAADKFPS NNKMDTNGNA  600
CSKYEYPGGS QCLGKWKEAT VSGRESLDGT ELIRPEKRLK TEEKLVGAMG VNPVERGYDG  660
THSCVPSQIS ESGLTRTKIE HSVNGKGATG KPETKIEQVG PVESIGCRQE RNNISMSANR  720
AVAHQTEHHF FRQEDAKSSN PAPPVPLLPV KVEVSELDDH RPVLKASLQF VVPSTTQTRL  780
ELPDPLSNAV GRKGRLDRNI VMLKDPMKRL WPVFYHETSL FVGFTGGWKS FVAANKLEAG  840
DLCVLLMDLD EDELVYDVEI TRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13853KRRRHNDDGDHKKKKK
23954KRRRHNDDGDHKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.12e-07B3 family protein