PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG032360.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 536aa MW: 58996.8 Da PI: 4.9911

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG032360.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.2	6e-31	56	199	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 lp+G++F+P+d+el+ e+L++k+ + +e+i++v+ i++++P++Lp ++++ ++ +fF++ +++y g+rk+r TRIDC6AG032360.1 56 LPAGVKFDPSDQELL-EHLEEKIGVGGskphmfI--DEFIPTVEndagICYSHPENLP-GTNKDGSSAHFFHSISNAYGCGQRKRRRisssdr 144 799**********.99876554555332..333444422344******.556677899*************97578888 PP NAM 78 ...tksgyWkatgkdkevlskkgelvglkktLvfykgrapkge..ktdWvmheyrl 128 ++ +W++tgk+k+v++ +g +g kk+Lv+ykg++ g+ ktdWvmh+y+l TRIDC6AG032360.1 145 ttsDEHVRWHKTGKSKPVYD-NGVMKGWKKILVLYKGSQTGGKpdKTDWVMHQYHL 199 75444889********.999*******9987766555*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MARSWLITCR GVAKKVRNAH CSNRQISEVG AEACRECPNC KHIIDNSDVS IQWPGLPAGV 60 KFDPSDQELL EHLEEKIGVG GSKPHMFIDE FIPTVENDAG ICYSHPENLP GTNKDGSSAH 120 FFHSISNAYG CGQRKRRRIS SSDRTTSDEH VRWHKTGKSK PVYDNGVMKG WKKILVLYKG 180 SQTGGKPDKT DWVMHQYHLG VEENEKVGEF VVSKIFYQLK TRPVDKSEAE MANEESTAFT 240 ASICPKTPMT KIPPCRPKNS PCETEQNDPG QEEETVSLAE NANNPAWCAL SSQPVEVALE 300 AGTCSLDKSL RHHEVLDSSN LENSTFGRPI LSQLMNETLN KNLCALHGLP DLHNVNLGTA 360 PTDLQITKGE NVSLVADAEN TACCSLASQD VEVTSQAGTS LVESLLHHEV SDLHNANLGT 420 PRDLQIAKEE SVSLVDEAEK WCGLASQAVD VAFHAGTSLD ESLRCHEVLD SFDHEKSLTF 480 DRPIYSQGRD GGLENNLYSL NGLPDLQGVD FGTPIDDLQG LQFYSQESLG SWLERM

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MARSWLITCR GVAKKVRNAH CSNRQISEVG AEACRECPNC KHIIDNSDVS IQWPGLPAGV  60
KFDPSDQELL EHLEEKIGVG GSKPHMFIDE FIPTVENDAG ICYSHPENLP GTNKDGSSAH  120
FFHSISNAYG CGQRKRRRIS SSDRTTSDEH VRWHKTGKSK PVYDNGVMKG WKKILVLYKG  180
SQTGGKPDKT DWVMHQYHLG VEENEKVGEF VVSKIFYQLK TRPVDKSEAE MANEESTAFT  240
ASICPKTPMT KIPPCRPKNS PCETEQNDPG QEEETVSLAE NANNPAWCAL SSQPVEVALE  300
AGTCSLDKSL RHHEVLDSSN LENSTFGRPI LSQLMNETLN KNLCALHGLP DLHNVNLGTA  360
PTDLQITKGE NVSLVADAEN TACCSLASQD VEVTSQAGTS LVESLLHHEV SDLHNANLGT  420
PRDLQIAKEE SVSLVDEAEK WCGLASQAVD VAFHAGTSLD ESLRCHEVLD SFDHEKSLTF  480
DRPIYSQGRD GGLENNLYSL NGLPDLQGVD FGTPIDDLQG LQFYSQESLG SWLERM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	138	RKRRR
2	134	160	RKRRRISSSDRTTSDEHVRWHKTGKSK
3	135	139	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	7e-79	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG032360.1