PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG028100.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 105aa MW: 11935.2 Da PI: 10.1705 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.1 | 2.4e-06 | 8 | 36 | 11 | 39 |
HHHHHHHHHHHHHHCTSCCC...TTS-ST CS HLH 11 rRRdriNsafeeLrellPkaskapskKls 39 rRR+riN+++ L+ l+P++ k + +K+s TRIDC6AG028100.5 8 RRRSRINEKMKALQILIPNSNKVGTTKPS 36 89*****************7455555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence |
KCTRAAERRR SRINEKMKAL QILIPNSNKV GTTKPSTVPL CFSLSLNSGL LSLVVLVWLQ 60 TDKASMLDEA ILIEYLKQLR LQVHVSKCMS QWLVDVETNL LVHLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67110.1 | 5e-14 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG028100.5 |