PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG028100.24
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 214aa    MW: 23174.5 Da    PI: 9.8035
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG028100.24genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.6e-091471881054
                        HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHH..HHHHHH CS
                HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAv..eYIksL 54 
                        +rRR+riN+++  L+ l+P++      K +Ka++L +A+  eY+k+L
  TRIDC6AG028100.24 147 KRRRSRINEKMKALQILIPNS-----NKTDKASMLDEAIliEYLKQL 188
                        8*******************7.....5***********544999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
CQGSGAGERG SGDIPGGRGR RVPGGRRGGW GICVPTSTSR SSSSCCASPS SSPRFRRHLE  60
GATGFYKSEM GGSSEPESHG TSDCPRGGGG SSSKCTRAAE VHNLSERVVA RFPVVNHFPL  120
SFTPLFCSSR PIFLADHCLL ACLIGVKRRR SRINEKMKAL QILIPNSNKT DKASMLDEAI  180
LIEYLKQLRL QVHVSKCMSQ WLVDVETNLL VHLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.14e-20bHLH family protein